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Volume 9
Bambusicolous fungi: A review
More than 1100 species of fungi have been described or recorded world-wide from bamboo and include ca. 630 ascomycetes, 150 basidiomycetes and 330 mitosporic taxa (100 coelomycetes and 230 hyphomycetes). Most taxa have been recorded from Asia, with relatively fewer known from India and South America. The bamboo genera Bambusa, Phyllostachys, Sasa, and Arundinaria are rich sources of fungi yielding 253, 178, 84, and 82 species, respectively. Most species are saprobes found on decaying culms, although pathogens and endophytes have also been recorded. The most common families of ascomycetes on bamboo are the Hypocreaceae, Phyllachoraceae and Xylariaceae, represented by the common genera Nectria, Phyllachora and Hypoxylon respectively. The most well represented genera of hyphomycetes on bamboo are Acrodictys, Coniosporium, Periconia, Podosporium and Sporidesmium. Suggestions for future work on bamboo fungi are made.
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New and interesting lichens and lichenicolous fungi in Brazil
New and interesting lichens and lichenicolous fungi are reported from two regions in Brazil, mainly from the Serra do Caraça (Minas Gerais), but also from the Serra da Mantiqueira (São Paulo). These are some of the results of an international field meeting aimed at collecting topotype material from taxa described from the region by Vainio a century earlier. The following species are described as new: Acarospora oligyrophorica Aptroot, Fellhanera antennophora Aptroot, Graphina coccospora Aptroot, Lepraria multiacida Aptroot, Placidiopsis hypothallina Aptroot, Pyrenula fusoluminata Aptroot, Pyrenula quarzitica Aptroot, Sulcopyrenula cruciata Aptroot & Topeliopsis globosa Aptroot. The following new combinations are proposed: Bacidiopsora tenuisecta (Vainio) Aptroot comb. nov., Brigantiaea subobscurata (Vainio) Aptroot comb. nov., Caloplaca subrubelliana (Vainio) Aptroot comb. nov., Campylothelium megalostomum (Vainio) Aptroot comb. nov., Graphina subvestita (Vainio) Aptroot comb. nov., Micarea poliocheila (Vainio) Aptroot comb. nov., Micarea subgranulans (Vainio) Aptroot comb. nov., Micarea subternaria (Vainio) Aptroot comb. nov., Ocellularia piperis (Vainio) Aptroot comb. nov., Ocellularia stylothecium (Vainio) Aptroot comb. nov., Pyrenula crassiuscula (Malme) Aptroot comb. nov., Rinodina atrofuscata (Vainio) Aptroot comb. nov. and Scoliciosporum camptosporum (Vainio) Aptroot comb. nov. For many other species the first records from the Southern hemisphere or from (South) America are given.
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Species richness patterns in symbiotic gut fungi (Trichomycetes)
The most common pattern in biology indicates that diversity (species number) increases with area and can be represented as species-area curves following a power model equation. Biogeographers and ecologists have observed this relationship both among larger areas of single biotas and among islands of one archipelago. Species-area relationships have not been well established for fungal communities. The few studies that exist show heterogeneous results. An attempt to test the species-area relationship in Trichomycetes was made for data collected between 1960-2000. During this period 46 species from different USA counties in Arkansas, Kansas, Missouri and Oklahoma were identified. Species numbers were plotted against county area as sample plots. The data strongly fit to a power regression curve (r2 = 0.92). This suggests a strong biogeographic signal for the species-area relationship of these symbiotic fungi.
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Aquatic fungi from Lake Fuxian, Yunnan, China
Sixty-four higher fungi were recorded on submerged wood, bamboo and tree roots in Lake Fuxian, Yunnan, China. Aniptodera chesapeakensis, Dictyosporium heptasporum, and Savoryella lignicola were frequently collected on wood samples. The occurrence of Halosarpheia retorquens and Halosphaeria cucullata, which have previously been recorded from marine habitats, is interesting, while a species of Lulworthia is the first record of this genus from a lake. Pseudohalonectria fuxianii sp. nov. is described and illustrated and compared with similar species in the genus. This is the first report of aquatic fungal communities in a lake from mainland China and the data is compared with previous studies.
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Re-interpretation of Cocconia palmae, with description of the genus Dianesea (Ascomycota: Dothideomycetidae)
The original circumscription of Cocconia palmae F. Stevens was found to consist of elements of two unrelated species, belonging to Hysterostomella Speg. (Parmulariaceae) and an undescribed genus of Dothideomycetidae probably referable to the Coccoideaceae respectively. The name Cocconia palmae is typified to represent the latter fungus, for which the new genus Dianesea is introduced.
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Endophyte assemblages in young, mature and senescent leaves of Rhizophora apiculata:
evidence for the role of endophytes in mangrove litter degradation
Rhizophora apiculata leaves of different age levels were studied for their endophyte assemblages. The number of species as well as the number of isolates of endophytes that could be recovered from the leaves increased with leaf age. The endophyte mycobiota did not remain static after leaf fall. The endophytes appeared to grow or decline depending on the environment where the leaves might fall (soil or sea water). Some endophytes such as Cladosporium cladosporioides, Phyllosticta sp. and Sporormiella minima declined in fallen leaves, irrespective of the environment where the leaf might fall. A few fungi that probably existed as endophytes in low frequencies in living leaves appeared in higher frequencies after leaf fall. Such growth activity of these endophytes and their capacity to produce certain enzymes are indicative of their potential role in litter degradation.
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Haliphthoros spp. from spawned eggs of captive mud crab, Scylla serrata, broodstocks
Monitoring of the fungal flora of spawned eggs of captive mud crab, Scylla serrata, was conducted in several hatchery runs at the Aquaculture Department of Southeast Asian Fisheries Development Center in Iloilo, Philippines. Quantification of the egg mycoflora revealed the dominance of oomycetes, particularly Haliphthoros spp. among spawners which aborted their eggs prior to hatching. Two species of Haliphthoros (H. philippinensis and H. milfordensis) were identified from the 24 isolates collected. Haliphthoros milfordensis was the dominant species. Physiological studies on vegetative growth and sporulation of the two species show that H. philippinensis have wider optimal range for salinity and temperature requirements than H. milfordensis, especially in sporulation. The pathogenicity study showed that only H. milfordensis was pathogenic to spawned eggs of S. serrata, while H. philippinensis was not. Infection of S. serrata eggs by H. milfordensis was observed starting at two days after inoculation of zoospores with 2-5% infection rate, reaching up to 10% at five days post-inoculation.
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Dominant fungi from Australian coral reefs
This report describes 617 fungi isolated from coral reefs in tropical Australian marine environments. Host substrates include 62 sediments, algae (8 Rhodophyta, 9 Chlorophyta, 3 Phaeophyta) and vertebrates/invertebrates (16 Bryozoa, 21 Chordata, 16 Cnidaria, 70 Porifera). Results indicate that some reef dwellers may provide a natural reservoir for fungal genera normally associated with other organisms. Taxa such as Aspergillus and Penicillium, commonly thought to originate from terrestrial run-off, were frequently isolated from offshore hosts. One hundred and twenty one isolates (19.6% of the total) sporulated, but could not be identified using the available taxonomic keys, while 99 isolates (16%) did not sporulate, and thus were classified as sterile mycelium. Some isolates, such as Cochliobolus spp., have not previously been described from marine sources, and could represent novel taxa. Slow growing marine ascomycetes were not isolated, probably because they were outgrown by faster growing taxa.
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Ligninolytic enzyme production by Polyporaceae from Lombok, Indonesia
Polypores were isolated from several forests in Lombok Island, Indonesia and screened for their ability to degrade lignin. Sixty of sixty-five samples isolated were tested using a qualitative plate assay through direct visualization of agar plate decolourisation containing the polymeric dye Poly R-478 (0.02% w/v). Fifteen isolates were able to decolourise the dye, indicating a lignin-degrading ability. Spectrophotometric enzyme assays from all selected isolates were carried out to examine the production of ligninolytic enzymes (laccase, lignin peroxidase and manganese peroxidase). Twelve selected isolates produced all three kinds of enzymes tested, but Hexagonia tenuis sp. A, Inonotus patouillardii and Stereum sp. produced only laccase and lignin peroxidase. The importance of this study to support biotechnology in the paper industry is discussed.
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Rapid biodiversity assessment of a tropical myxomycete assemblage - Maquipucuna Cloud Forest Reserve, Ecuador
During a three week period in late November and early December 1998, the assemblage of myxomycetes associated with cloud forests in the Maquipucuna Cloud Forest Reserve (western Andes, Ecuador) was investigated by means of field collecting and substratum sampling for subsequent preparation of moist chamber cultures. From more than 1000 myxomycete records (with about half of these from moist chamber cultures), 77 taxa were identified with certainty; 30 of these are new for the country. Taxonomic descriptions and ecological observations of rare and or tentatively new taxa encountered in the study are provided in an annotated checklist. The frequency distribution of the 67 taxa identified from field records can be described by a log normal model. This allows an estimation of the total number of species to be expected, and the number actually recorded represents about 92% of this estimated figure. Using a bootstrap method with a saturation model, the same type of estimate was determined for a series of substrata used for the moist chamber component of the study. With one exception, all estimates obtained fell between 67 and 92% of the total number of species to be expected. Records of taxa obtained from moist chamber cultures and collected in the field complemented each other in terms of the species represented. As such, it can be assumed that more than 75% of all species of myxomycetes occurring in the cloud forests investigated were indeed recorded in our study. This demonstrates the possibility of assessing biodiversity of myxomycetes in tropical forests with a reasonable sampling effort, if data from field studies and from moist chamber cultures of substratum samples are combined.
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New species from each of the pyrenomycete genera Hyponectria, Physalospora and Trichosphaeria from Queensland, Australia
Three new species of ascomycetes each occurring on leaves of Acacia, Eucalyptus and Lomandra respectively in Queensland, Australia are described and illustrated as Hyponectria acaciae sp. nov., Physalospora lomandrae sp. nov. and Trichosphaeria eucalypticola sp. nov.
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Planistromella opuntiae sp. nov. from Queensland, Australia, and key to the known species
A new species of a dothideaceous ascomycete, Planistromella opuntiae is described and illustrated from Queensland, Australia. Species of Planistromella are known to occur on members of Agavaceae. This new species is found on Opuntia, a member of the family Cactaceae. It is easily separated from the other known species with 1-septate ascospores by its comparatively narrower ascospores.
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UV light-induced conversion of Pestalotiopsis microspora to biotypes with multiple conidial forms
Pestalotiopsis microspora is one of the most commonly isolated endophytes associated with tropical and semitropical rainforest plants. Taxonomic classification of this fungus is primarily based on conidial morphology. The conidia of this genus generally possess five cells, are borne in acervuli, and possess appendages. It has been possible, via UV irradiation, to convert conidia of P. microspora (2-3 apical and 1 basal appendage per conidium) into biotypes that bear a conidial resemblance to other fungi including Monochaetia spp., Seridium spp. and Truncatella spp. Single cell cultures of each of these biotypical biotype fungi retain 100% identity to 5.8s and ITS regions of DNA to the wild type source fungus P. microspora, indicating that no UV induced mutation occurred in this region of the genome. Furthermore, the conidia of these UV generated biotypes do remain true to biological form by also producing spore types in their acervuli that are identical to the biotypical culture types from which they were derived. The implications of this study are that many of the genera in this group of fungi are either closely related or identical.
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Volume 10
Introduction to fungal succession
This volume of Fungal Diversity is devoted to fungal succession. The term fungal succession is used loosely throughout the volume. A precise definition of fungal succession is "the sequential occupation of the same site by thalli (usually mycelia)", but the term can be used more loosely to refer to "the sequential occurrence of fungal fruiting bodies on substrata as it decays". This volume brings together various studies on fungal succession including the traditionally studied macrofungi and the less well-studied microfungi. In this way we have brought together much of the data available on fungal succession. The final paper in this volume discusses the problems associated with studying fungal succession, especially in microfungi, and discusses possible methods to overcome these problems.
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Fungal succession or sequence of fruit bodies
Succession is one of the most widely known ecological concepts. It is intuitive and yet extremely complex. There have been many fungal succession studies on a wide diversity of substrates and yet we still know very little about the mechanisms that drive succession. Direct methods of observing fungal succession (change in occupation of space by thalli) use destructive techniques and therefore change in mycelia in a point in space over time cannot be observed. However, these direct destructive methods, with appropriate replication, are extremely useful for discovering general patterns of succession. Indirect methods often observe only the fruit body sequence on a substrate. These studies can also be extremely useful, but need to be interpreted with caution. In addition the underlying assumption that sporulation reflects changes in mycelial occupation of space in the substrate needs to be considered carefully.
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Fungal succession at different scales
Fungal succession can be considered at the macro- or micro-scale levels. Macro-scale succession can be recognized as the integration of different kinds of seres of fungi associate with a plant community. On the other hand, micro-scale succession can be recognized as substratum succession or fungal succession associated with plant succession at the patch level. Succession of pyrophilous fungi following forest fire is categorized as macro-scale succession, but succession of pyrophilous fungi following bonfires and that of ammonia fungi following addition of ammonia are categorized as micro-scale succession. Nutrient cycling in the areas disturbed by local burning or the addition of ammonia is maintained the activities of existing microbes including fungi such as pyrophilous fungi and ammonia fungi (These fungi are present in small numbers in undisturbed areas, but quickly increase in biomass following the disturbances). This paper explores the concept of macro- and micro-scale succession in fungi.
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Seasonality and sequential occurrence of fungi on wood submerged in Tai Po Kau Forest Stream, Hong Kong
The effects of seasonality on freshwater lignicolous fungi in Tai Po Kau Forest Stream was investigated by examining the fungal communities on naturally occurring submerged wood. Fungal succession (sequential occurrence of sporulating fungi) was also investigated by studying changes of fungal communities on wood baits of Machilus velutina and Pinus massoniana over 21 months. Higher species richness, fewer dominant fungi and more infrequent fungi were found on naturally occurring submerged wood during the hot wet season, as compared to the cool dry season. Fungal communities were variable on collections made over different hot wet seasons, but the communities were consistent during the cool dry season collections. Aniptodera chesapeakensis, Massarina ingoldiana and Sporoschisma nigroseptatum dominated the fungal communities during the cool dry season, while Nectria cf. byssicola was dominant during the hot wet season. During 21 months submersion of wood baits of Machilus velutina and Pinus massoniana, three distinct types of fungal communities were observed, i.e. pioneer, early and later successional groups. Higher species richness and more dominant fungi were found on both wood types during the early successional stage. Differences in successional groups were more prominent on wood baits of Pinus massoniana. Fungal communities on wood baits of Machilus velutina and Pinus massoniana were similar during both pioneer and early successional stages, but differed at the later successional stage. Nectria cf. byssicola, Sporoschisma nigroseptatum and S. uniseptatum were early colonisers on both wood types. Savoryella lignicola was a later coloniser on Machilus velutina, while Dictyosporium digitatum, Massarina bipolaris and M. ingoldiana were later colonisers on Pinus massoniana. A total of 175 fungi, including 56 ascomycetes, 1 basidiomycete, 115 anamorphic fungi, 2 myxomycetes and 1 zygomycete, were recorded in this study.
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Fungi colonising and sporulating on submerged wood in the River Severn, UK
Test blocks of Fagus sylvatica and Pinus sylvestris were submerged in the River Severn, England, UK, for 92 weeks and recovered at frequent intervals. Recovered samples were incubated in moist chambers and sporulating fungi on the test blocks were recorded. Fifty fungi consisting of 35 anamorphic species, 13 Ascomycota and 2 Basidiomycota were identified. Species diversity (40) was greatest on the beech test blocks, while only 28 species occurred on the Scots pine test blocks. The most common fungi on beech were Camposporium pellucidum, Dictyochaeta parva, Pseudohalonectria lignicola (each with 95% occurrence) and Trichocladium lignicola (89%). On Scots pine T. lignicola occurred on 95% of the test blocks. A succession of sporulating fungi was observed on the wood over a 3 month incubation period in the laboratory. The results are compared with other studies on lignicolous aquatic fungi from temperate and tropical locations. These indicate that different fungal communities occur in different geographical locations.
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The macrofungal community and fire in a Mountain Ash forest in southern Australia
Changes in the occurrence of macrofungi with time following forestry activities and fire were studied at 14 sites in Mountain Ash (Eucalyptus regnans) dominated forests, in the Eastern Central Highlands, Victoria, Australia. Forests of 0-57 years after fire were used to compare macrofungal communities. Pattern analysis through classification and ordination showed that there was a distinct change in the macrofungal community over time since disturbance. Three phases were apparent in the process of recolonisation after fire: (1) immediate post-fire (0-year), (2) an intermediate phase (2- and 4-year-old), and (3) a mature phase (7-year-old and older). The macrofungi evident in the Mountain Ash forest during the first year after fire were the most distinctive. The change in the suite of macrofungi closely reflected the changes in macrofungal substrates in the forests of different ages. Macrofungi found to be specific to certain stages of regeneration after fire will provide a subset of indicator taxa suitable for use in further surveys.
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The effect of pre-inoculation of balsa wood by selected marine fungi and their effect on subsequent colonisation in the sea
A field study was undertaken in order to examine the effect of pre-incubation of test blocks of balsa with marine fungi and their subsequent effect on colonisation when submerged in the sea. Four marine ascomycetes, Ceriosporopsis halima, Corollospora maritima, Halosphaeriopsis mediosetigera and Marinospora calyptrata, were pre-inoculated onto balsa test blocks before submergence in the sea. Control and pre-inoculated test blocks were submerged in the sea at Langstone Harbour, Portsmouth, England, and recovered at 2, 6, 9 and 15 months and the fungi colonising them were recorded. The fungi pre-inoculated on the test blocks were the only species sporulating; there was no sporulation of native marine fungi. The control test blocks were heavily colonised by numerous sporulating marine fungi, and these were similar to those reported in previous studies in Langstone Harbour. These results are discussed in relation to inhibition of sporulation and colonisation and interference competition.
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Fungal succession on senescent leaves of Manglietia garrettii in Doi Suthep-Pui National Park, northern Thailand
Twenty-two fungal taxa were identified on decaying senescent leaf baits of Manglietia garrettii during a 56 day study. Most of the taxa were the same as those occurring on naturally decaying leaves in the same forest area collected at the same time. Distinct fungal communities were observed to occur in sequence on the leaves, with the dominant species on the leaves being different at each succession stage. There was no noticeable effect on fungal communities whether the upper or lower leaf surface was in contact with the forest floor. The greatest fungal diversity occurred between day 4 and 40 (mature community stage), with most species being present on day 40. On day 56, leaves were found to be skeletonised, so the fungal communities had decreased in number.
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The coprophilous succession
This paper reviews the background to studies of the coprophilous succession, presents some data from observations made on samples collected for a study of the occurrence and diversity of coprophilous fungi, and suggests where further studies might help to elucidate the functional aspects of the succession.
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Fungal colonisation of wood in a freshwater stream at Tad Ta Phu, Khao Yai National Park, Thailand
A study of the fungus colonisation of two timbers (Dipterocarpus alatus and Xylia dolabriformis) was initiated in a freshwater stream at Tad Ta Phu at Khao Yai National Park, Thailand. Wood was exposed and recovered every month for 12 months, then incubated in moist chambers and fungal colonisation recorded. Data on sequence of fungal sporulation, the frequency of occurrence of the fungi and percentage cover on the test blocks are presented. Seventy-three species were recorded: 48 on D. alatus and 47 on X. dolabriformis. Fungi were categorised into 3 groups: Group 1 those present on over 60% of the test blocks: with Helicomyces roseus and Halosarpheia aquadulcis on D. alatus and Helicomyces roseus on X. dolabriformis. Group 2 fungi were those present on more than 20% of the test blocks and numbered 8 each on D. alatus and X. dolabriformis. Group 3 fungi constituted those present on less than 20% of the test blocks. Fungi could also be grouped into those that appeared early on the wood: Bombardia sp., Cancellidium applanatum, Dictyochaeta sp. 1, H. roseus, Pycnidial sp. 1, Sporidesmiella hyalosperma var. novae-zelandiae, Sporoschisma saccardoi and unidentified hyphomycete sp. 05 on D. alatus; and with Chaetopsina fluva, Dictyochaeta sp. 1, H. roseus, Cosmospora chaetopsinae, Stilbella holubovae and Trematosphaeria sp. 2 on X. dolabriformis. Intermediate colonisers included: Aquasphaeria dimorphospora, Eluviespora bipolaris, Hymenoscyphus varicosporoides, Sirosphaera sp. 1, Tricladium anamorph of Hymenoscyphus varicosporoides on D. alatus, and Biflagellospora gracilis, B. japonica, B. papillata, B. siamensis, Cancellidium applanatum, Halosarpheia aquadulcis and Thozetella nivea on X. dolabriformis. Late colonisers were Massarina sp. 3 and Vargamyces aquaticus on D. alatus and Helicosporium vegetum, Savoryella verrucosa and Tricladium anamorph of Hymenoscyphus varicosporoides on X. dolabriformis. The data shows a clear difference in the dominant species on each timber and is compared with other studies from tropical and temperate regions.
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Fungal diversity and succession on pods of Delonix regia (Leguminosae) exposed in a tropical forest in Thailand
The succession of fungi on pods of Delonix regia has been investigated at Khao Yai National Park, Thailand. The fungi colonising Delonix regia pods were dominated by anamorphic fungi. Succession of fungi begins with colonisation by classical seed fungi, e.g. Aspergillus, Chaetomium, Penicillium and Rhizopus species, when pods were dry and attached to the tree. As soon as the pods fall on the forest, the classical seed fungi are replaced rapidly by litter fungi, e.g. Dictyochaeta, Helicosporium, Phaeoisaria, Phoma and Sporoschisma species. The moisture content of the pods may be an important factor in determining the mycota they support.
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Experimental analyses of successive occurrence of ammonia fungi in the field
Sequential appearance of the ammonia fungi after urea treatment (800 g/m2) was observed in the field and following 20 C incubation of soils from L-A1 horizons collected at different days after the treatment. The results indicate that successive occurrence of saprobic ammonia fungi in the field results from the combination of sequential propagation (colonisation) of ammonia fungi and the time needed for each fungus to produce reproductive structures. The sequential propagation and the fruiting time of each ammonia fungus may be explained by their degree of tolerance to high concentrations of NH4-N under alkaline to neutral conditions. The duration of occurrence of saprobic ammonia fungi in the field was shortened by interactions between organism(s) and changes in soil conditions, especially pH and NH4-N concentration, resulting from activities of soil organisms including ammonia fungi. Two hundred soil core samples (5 × 5 × 5 cm) collected from a plot (50 × 100 cm) were separately placed in sterilized flasks. Twenty-two mg urea/g dry soil was added to each flask and the water content was adjusted to 60%. Following incubation at 20 C, migrule (spores and mycelia, etc.) frequencies plotted for Amblyosporium botrytis, Ascobolus denudatus, Tephrocybe tesquorum, and Coprinopsis phlyctidospora were estimated as 4/200, 38/200, 52/200 and 9/200, respectively. These four ammonia fungi showed no specific co-existence between each other.
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A new approach to studying microfungal succession on decaying pine needles in an oceanic subtropical region in Japan
The sequence of fungal succession on decaying pine needles was evaluated using a novel approach. Twenty-two microfungal community data sets were obtained from individual surveys in an oceanic subtropical region and were rearranged and modified. The constancy and the abundance values for individual species were calculated by selecting the dominant species among the 122 species recorded. Three succession stages were recognized and characteristic species at each stage are considered. The results of this novel approach are compared with the orthodox method based on determining the vertical distribution of microfungal communities at a single site.
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Fungal succession on fronds of Phoenix hanceana in Hong Kong
Seventy-three fungal taxa were identified during the decomposition process of frond baits of Phoenix hanceana, comprising leaves, rachis-tips, mid-rachides and rachis-bases. Pioneer, mature and impoverished communities were observed in sequence on the frond baits. Fungal communities on different frond parts reached pioneer, mature and impoverished communities at different rates. Fungal communities on leaves and rachis-tips matured more slowly than other parts, but became impoverished rapidly thereafter, and samples were completely decayed at month 13. On the contrary, fungal communities on mid-rachides and rachis-bases matured earlier at month 1, but became impoverished at month 13. Naturally occurring fronds were also examined at the same time. Only half of the fungi were common to baits and naturally occurring fronds. Thus, examination of both frond baits at different stages of decomposition and naturally occurring fronds is recommended to obtain a better estimation of biodiversity.
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Fungal succession on bamboo in Hong Kong
Fungal succession on Bambusa tuldoides has been studied in Hong Kong. Fungal communities changed over time during the decay process. Based on sporulation of fungi, the fungal communities on bamboo baits can be categorized into early colonisers, middle-stage colonisers, later colonisers, regular inhabitants and sporadic inhabitants. Fungal communities on naturally dead bamboo and baits comprised rare species and mainly middle-stage colonisers. Seasonality had an effect, as more fungi were present during the wet season. Rainfall positively impacted on fungal occurrence, but temperature and relative humidity appeared to have little influence. Anthostomella species are regular inhabitants of bamboo, being dominant throughout the observation period and probably play a dominant role in its decomposition.
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Infection sequence and pathogenicity of Ophiostoma ips, Leptographium serpens and L. lundbergii to pines in South Africa
Three exotic bark beetles (Coleoptera: Scolytidae), Hylastes angustatus, Hylurgus ligniperda, and Orthotomicus erosus, infest Pinus spp. in South Africa. These beetles are generally considered as secondary pests, but can also act as vectors of ophiostomatoid fungi. In South Africa, at least 12 ophiostomatoid fungi are associated with the three beetle species, of which Ophiostoma ips, Leptographium serpens, and L. lundbergii, occur most frequently. The aim of this study was to test the pathogenicity of the three fungi to pines in South Africa. Two isolates of each fungus were inoculated on various species of pines in different areas of South Africa. The inoculated fungi caused resin exudation and sapwood discoloration around inoculation points. There were significant differences in lesion length between species inoculated, times of inoculation and plantation areas. Although Ophiostoma ips gave rise to longer lesions than L. serpens and L. lundbergii, our results suggest that none of these species should be considered as serious pathogens.
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Succession: where do we go from here?
Various aspects of fungal succession, and interactions between fungi, are reviewed and the problems encountered highlighted. Suggestions for future research are presented, outlining some of the techniques currently available. Particular attention is focused on the need to understand the chemical interactions involved in succession.
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Volume 11
Extracellular enzyme production by freshwater ascomycetes
Thirty species of freshwater ascomycetes isolated from woody and/or herbaceous substrates were screened for their ability to produce extracellular degradative enzymes on solid media. Enzymes tested included: amylase, endoglucanase, endoxylanase, ß-glucosidase, laccase, lipase, pectinase, peroxidase, polygalacturonase, polyphenoloxidase, protease, tyrosinase and ß-xylosidase. All species were positive for cellulase and endoxylanase/ß-xylosidase. Two species, Chaetomastia typhicola (herbicolous) and Massarina sp. A25 (lignicolous) tested positive for all enzyme assays. Submersisphaeria aquatica (lignicolous) was positive for all enzymes except tyrosinase and Jahnula sp. A322 (lignicolous) was positive for all enzymes except polyphenoloxidase. Generally, the species which were isolated from herbaceous substrates and woody/herbaceous substrates had good growth rates on different types of enzyme media used (such as, peptone, yeast extract, glucose agar, etc.). Fifty percent of the lignicolous species produced pectin degrading enzymes, compared to about 80% for herbicolous and woody/herbicolous species, suggesting that there may be some specialization in the types of enzymes produced within substrate groups. The greatest differences among species occurred in the production of enzymes associated with detection of lignin degradation. Laccase and peroxidase detection depended on the assay technique used. Freshwater ascomycetes, as a group, produce many of the extracellular enzymes important in the decomposition of plant structural materials thereby supporting the idea that they play an important role in recycling in aquatic habitats.
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Annotated checklist of the lichens and lichenicolous fungi of Bhutan
An annotated checklist is presented of the 287 lichens and lichenicolous fungi known from Bhutan. The vast majority (225) are new records for the country, based on recent collections of 264 species by the second author. Most species were previously known from the Himalayas, but some represent considerable range extensions. Noticeable examples are the rare Ropalospora chlorantha, so far only known from eastern North America, and the first report from the Northern Hemisphere of Lepraria nigrocincta. Pyrrhospora bhutanensis is described as new to science.
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Mycoparasites on the coffee rust in Mexico
We surveyed coffee plantations for mycoparasites of the coffee rust (Hemileia vastatrix) in central Veracruz, México. We report the presence in natural conditions of six mycoparasites. Five are reported for the first time (Acremonium byssoides, Calcarisporium arbuscula, C. ovalisporum, Sporothrix guttuliformis, Fusarium pallidoroserum) as mycoparasites of H. vastatrix, the other species, Verticillium lecanii, had been previously reported.
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Taxonomic notes on the genus Endoxylina (Diatrypales, Ascomycotina) and description of a new species from Mexico
Endoxylina tehuacanensis is proposed as a new species in the Diatrypales (Ascomycotina). The specimens were collected upon fallen branches of Acacia constricta (Leguminosae) in the southeastern part of the state of Puebla, Tehuacan valley, Mexico. A description and illustrations of the morphological characters of this new species are provided. Moreover a brief review all species belonging to Endoxylina is presented.
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An accounting of the worldwide members of Mycena sect. Longisetae
Eleven species are accepted in a redefined Mycena sect. Longisetae. Two species, M. palmicola and M. khonkhem, are described as new, and M. clavulifera is redescribed based on material collected recently in Thailand. Mycena trichocephala, previously accepted in sect. Sacchariferae is herein accepted in sect. Longisetae. Two stirps are provisionally accepted to accommodate the 11 species: stirps Brunneisetosa (4 species) and stirps Longiseta (7 species). All members of sect. Longisetae develop primordia covered with numerous, erect, stiff pileosetae that aid to deter animal predation on the immature hymenophore. All included species develop pileipelli with acanthocyst cells and stipitipelli with non-spinulose cortical hyphae. The center of diversity for Mycena sect. Longisetae is southeast Asia.
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Intralichen, a new genus for lichenicolous 'Bispora' and 'Trimmatostroma' species
Intralichen gen. nov. is introduced for four dematiaceous hyphomycetes with mycelia growing inside the hymenia and thalline tissues of lichens or lichenicolous fungi and sporulating at the surface: I. baccisporus sp. nov., I. christiansenii comb. nov. (syn. Bispora christiansenii), I. lichenicola comb. nov. (syn. Trimmatostroma lichenicola), and I. lichenum comb. nov. (syn. B. lichenum). A key to the species is provided and all known hosts and reports of the species are summarized. litter degradation.
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New anamorph fungi with rhombic conidia from Mexican tropical forest litter
Two anamorph fungi, collected on leaf litter from Mexico are proposed as new taxa. One of them, Beltraniella fertilis, is characterized by having branched conidiophores with fertile apices. The other species, Pseudobeltrania macrospora, is characterized by having much longer conidia than all known species of Pseudobeltrania. Descriptions and illustrations in situ are provided, as well as culture characteristics. A key to the species of the genus Pseudobeltrania is included.
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Vertical distribution of saprobic fungi on bamboo culms
The fungi on decaying culms of bamboo were investigated along a vertical gradient at sites in Hong Kong and the Philippines. Saprobic fungi on standing culms of Bambusa spp. and Dendrocalamus spp. were vertically stratified in both countries, with a higher biodiversity towards the bases of the culms.
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Goidanichiella fusiforma sp. nov. from palm fronds in Brunei and Thailand
Goidanichiella fusiforma sp. nov. was identified from collections of decaying palm fronds in tropical rainforests in Brunei and Thailand. The new taxon is described and illustrated, and compared with similar taxa.
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Three taxa of Phallaceae in HMAS, China
Three taxa of Phallaceae occurring in China were reported, including a new variety Phallus costatus var. sphaerocephalus, a recently reconfirmed species Phallus sulphureus and a new record to China Mutinus fleischeri. All specimens examined were deposited in Herbarium Mycologicum Instituti Microbiologici, Academiae Sinicae (HMAS), Beijing.
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Two new hyaline Chalara species, and a key to species described since 1975ud Forest Reserve, Ecuador
Chalara siamense sp. nov. is described from dead petioles of Eleiodoxa conferta (Arecaceae) collected in Thailand, while a second hyaline species, C. schoenoplecti sp. nov., is described from senescent culms of Schoenoplectus litoralis (Cyperaceae) collected in Hong Kong. They are compared with similar species. Three species informally described by T. Matsushima are given Latin binomials and type specimens indicated, and a key to species described since 1975 is provided.
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A new smut fungus, Sporisorium centrale sp. nov., on Themeda from Australia
Sporisorium centrale sp. nov. (Ustilaginaceae, Ustilaginomycetes) is described and illustrated from Themeda triandra collected in the Northern Territory, Australia. It is compared with Sporisorium punctatum.
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Brobdingnagia eucalypticola sp. nov. and Phyllachora neolitseae sp. nov., two new phyllachoraceous ascomycetes from Australia
Brobdingnagia eucalypticola sp. nov. and Phyllachora neolitseae sp. nov., causing tar spots on leaves of Eucalyptus sp. and Neolitsea dealbata respectively are described and illustrated. s group of fungi are either closely related or identical.
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New species of foliicolous Loculoascomycetes on Dysoxylum, Melaleuca and Syzygium from Queensland, Australia
Four new species of foliicolous Loculoascomycetes, Didymella melaleucae sp. nov., Rosenscheldiella dysoxyli sp. nov., Seynesiella melaleucae sp. nov. and S. syzygii sp. nov. are described and illustrated from Queensland, Australia. The hosts are indicated by the specific epithet. Four Discostromopsis species are redisposed to Discostroma as Discostroma callistemonis (H.J. Swart) Sivan. comb. nov., D. elegans (H.J. Swart) Sivan. comb. nov., D. leptospermi (H.J. Swart) Sivan. comb. nov. and D. stoneae (H.J. Swart) Sivan. comb. nov.
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New species of Lembosia and Lembosina from Australia
Lembosia araucariae sp. nov., Lembosia syzygii sp. nov., Lembosina alyxiae sp. nov., Lembosina diospyrosi sp. nov. and Lembosina eucalypti sp. nov. on leaves of Araucaria, Syzygium, Alyxia, Diospyros and Eucalyptus respectively are described and illustrated from Australia. Lembosia hosagoudari nom. nov. is proposed to accommodate Lembosia syzygiicola Hosag. which is a later homonym of Lembosia syzygiicola (Hansf.) Deighton.
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Fungal endophytes associated with Cordemoya integrifolia
Fungal endophytes associated with leaves of the endemic plant Cordemoya integrifolia have been studied. The diversity and frequency of endophytic fungi in young and old leaves of Cordemoya integrifiola occurring inside and outside the Maccabhé Conservation Management Area (CMA) were investigated. Endophyte assemblages examined were quite diverse, consisting of 26 fertile fungal taxa and one sterile morphospecies. Pestalotiopsis sp. and Penicillium sp. were the dominant taxa. Differences were observed between the endophytic communities isolated from different tissues and tissues of different ages. Old leaves supported more endophytes than relatively younger ones. Likewise, more endophytic fungi were recorded in the veins and petioles than in the intervein tissues.
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Microfungi on the Pandanaceae: Two new species of Camposporium and key to the genus
During an investigation into the microfungi that inhabit the Pandanaceae, two new species of Camposporium were found. Camposporium fusisporum sp. nov. and C. ramosum sp. nov. are described, illustrated and compared with accepted species. Camposporium cambrense, C. japonicum and C. ontariense are also reported from the Pandanaceae. A key to Camposporium species, and a comparative synopsis table are provided.
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Volume 12
Phyllachora xanthii: redescription and designation of a new type
A tar-spot fungus found in the state of Paraná, Brazil on living leaves of Xanthium strumarium was identified as probably belonging to the previously known species Phyllachora xanthii. Available descriptions of this fungus are incomplete and the type material could not be located. A full description with illustrations and designation of a neotype is therefore provided.
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New spinose species of Mycena in sections Basipedes and Polyadelphia from Thailand
Three new species of Mycena with spinose pilei are described from material collected recently in Thailand. Mycena pseudoseta and Mycena mimicoseta are provisionally accepted in sect. Basipedes, and have recurved pileus spines formed from agglutinated, cylindrical, spinulose hyphae. Mycena dermatogloea is provisionally accepted in sect. Polyadelphia and has pileus spines formed from exudative gloeocystidia. Illustrations and comparisons with allied taxa are provided.
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Treehole fungal communities: aquatic, aero-aquatic and dematiaceous hyphomycetes
Hyphomycete communities in water-filled treeholes, a microhabitat in woodland ecosystems are discussed. Thirteen treeholes in four mountainous and forested areas of Hungary were examined for hyphomycetes. Eleven treeholes were detected in beech (Fagus sylvatica) and one each in oak (Quercus sp.) and ash (Fraxinus excelsior). Forty-five hyphomycete species were detected in the treeholes. The species number per treehole ranged from 3 to 10, as seen after litter incubation, but reached 19 when membrane filtration of treehole-water was included. The most frequent species was Alatospora acuminata (over 80% of treeholes). Distribution of Colispora cavincola appears to be restricted to treeholes. Conidia belonging to lesser known taxa, such as Arborispora, Dwayaangam, Trifurcospora and Trinacrium are discussed and illustrated. Membrane filtration of treehole-water suggests in situ sporulation of some aquatic hyphomycete species. Treeholes in SW Hungary were re-examined after 25 years and results suggest that they are long-lasting rather than ephemeral fungal microhabitats in woodland ecosystems.
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Effect of nitrogen resources and pH on growth and fruit body formation of Coprinopsis phlyctidospora
Following 3 weeks of cultivation of Coprinopsis phlyctidospora the final pH of NO3-N, asparagine-N (Asp-N) and Urea-N media increased, the final pH of NH4-N media decreased, and high nitrogen concentrations induced a high final pH. The changes in reduction oxidation potential were opposite to that of pH. Most mycelial biomass was generated in Asp-N media, while least biomass was generated in NH4-N media; high nitrogen levels promoted increased growth. During growth, NO3-N was produced by the utilization of Asp-N, Urea-N and NH4-N. The maximum yield of NO3-N was found in the NH4-N media. Under light, fruit bodies were formed in Urea-N, Asp-N and NO3-N media. In darkness, fruit bodies were formed in Urea-N media only. Addition of urea and NH4Cl to unsupplemented growth medium promoted the formation of fruit bodies.
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Induction of antibiotic production of freshwater fungi using mix-culture fermentation
Antibiotic activities of culture filtrates from twenty filamentous fungi, isolated from wood submerged in tropical freshwater habitats, were tested against a pathogenic strain of Candida albicans. These taxa were fermented separately in liquid medium in pure culture, while another set was fermented with the addition of a fluconazole-sensitive strain of Candida albicans in mix-culture. Fermentation was performed using potato dextrose broth at 25°C for 28 days, with diffuse day light and 240 rpm agitation. Culture filtrates were tested against a fluconazole-sensitive and two fluconazole-resistant strains of C. albicans. Anti-fungal activities against strains of C. albicans were not exhibited by any culture filtrates obtained from pure culture fermentation. In mix-culture fermentation, the culture filtrates of an undescribed species of Chloridium and Sporoschisma mirabile produced anti-fungal activities against all three strains of C. albicans tested.
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An evaluation of the fungal 'morphotype' concept based on ribosomal DNA sequences
In studies of fungal endophyte communities, mycelia sterilia are commonly isolated from plant substrates and grouped into morphotypes on the basis of cultural characteristics. In Polygonum multiflorum one hundred and sixty-nine strains of mycelia sterilia were isolated and grouped into 27 morphotypes. Six randomly selected morphotypes, each with 2-3 representatives, were subsequently subjected to ribosomal DNA sequence analysis. Nucleotide sequence similarities of the rDNA internal transcribed spacer (ITS) regions and the 5.8S gene were compared using UPGMA cluster analysis. Comparison of nucleotide sequences revealed high levels of similarity (ca. 91.63-99.53%) among strains within morphotypes. ITS and 5.8S sequences of species within various genera from GenBank were obtained to estimate levels of nucleotide similarity within and between well-established genera and species. This study verifies on the basis of ribosomal DNA sequence analysis the validity of these 'morphotypes' as taxonomic groups. A dendogram, illustrating relatedness of the morphotypes and reference taxa from GenBank is also presented.
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Biodiversity assessment of myxomycetes from two tropical forest reserves in Mexico
This paper presents the results of surveys carried out in two tropical forest reserves, El Edén (Quintana Roo) and Los Tuxtlas (Veracruz), in Mexico. A total of 857 collections of myxomycetes yielded 99 different taxa. One of these (Diderma yucatanensis) is described as a new species, two (Licea poculiformis and Stemonitis lignicola) are new records for the Neotropics, and 14 species and 2 varieties are new records for Mexico. Our data support the presence of a distinct assemblage of myxomycetes in tropical regions and substantiate the value of using the moist chamber technique as a complement to fieldwork in biodiversity studies. These same data also suggest that a number of different niches are exploited by myxomycetes in the tropics.
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Growth and fatty acid production of thraustochytrids from Panay mangroves, Philippines
Optimization of culture conditions with regard to the combined effects of salinity and temperature on biomass and fatty acid production of four thraustochytrid isolates were undertaken. Two strains of Schizochytrium mangrovei (IAo-1 and IXm-6), and one isolate each of Schizochytrium sp. (BSn-1) and Thraustochytrium sp. (IRa-8), isolated from fallen mangrove leaves, were used in this study. Results of the physiological study show that the best growth condition for Schizochytrium isolates was at a salinity range of 15-30 ‰ at 20-30°C, while that for Thraustochytrium sp. was at 22.5-30 ‰ at 25°C. Highest biomass production was 350 mg 50 mL-1 for Schizochytrium spp., and 133 mg 50 mL-1 for Thraustochytrium sp. Total lipid content (% freeze-dried biomass) ranged from 16.0-33.2% for S. mangrovei, 13.0-39.1% for Schizochytrium sp., and 11.4-37.5% for Thraustochytrium sp. Highest lipid production was observed at 15-22.5 ‰ salinity (25°C) for S. mangrovei, and at 15 ‰ (25°C) for Schizochytrium sp. and Thraustochytrium sp. Palmitic acid (16:0) and docosahexaenoic acid (DHA; 22:6n3) were the major components of the total fatty acid (TFA) content, comprising about 39-42% and 24-35%, repectively.
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A new cyanescent species of Gyroporus from China
A new bolete species discovered from Guangdong Province of China, Gyroporus brunneofloccosus, is formally described and illustrated. Type (HMIGD 4920) is deposited in the Herbarium of Guangdong Institute of Microbiology (HMIGD), Guangzhou.
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Several rare entopathogenic fungi from the Western Sichuan mountains
Two new species of Cordyceps and a new species of Paecilomyces were collected from Dujiangyan Forest Park, Huanglong Nature Reserve and Xilin Jokul respectively. These new species are C. sichuanensis which parasitizes the adults of Pentatomitae (Hemiptera), C. dayiensis which has a very thin ascus cap and Paecilomyces rariramus with synnemata consisting of a few branchlets and subglobose conidia.
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An integrated approach to taxonomical identification of the novel filamentous fungus strain producing extracellular lipases: morphological, physiological and DNA fingerprinting techniques
A new filamentous fungal strain was isolated into pure culture and initially named as strain L-1. The strain was found to secrete a high level of extracellular lipase at high temperatures. The identification of the isolate was performed by the combination of conventional morphological-physiological methods, scanning electron microscopy and RAPD. Phenotypic and genotypic characteristics of the L-1 strain were compared to reference strains. The morphological characteristics, radial growth rate at different temperatures and surface ornamentation of sporangiospores of the isolate almost completely match the reference strain Rhizopus [= microsporus var. rhizopodiformis VKM F-3693. The strain L-1 was characterized by high growth rate and the spore maturation abilities at 50°C. These characteristics are unique among all other strains of Rhizopus. The results of RAPD-diagnosis indicate the high degree of genetic similarity between strains L-1 and F-3693. We therefore identified strain L-1 as Rhizopus microsporus var. rhizopodiformis. The strain has been submitted and included in the All-Russian Collection of Microorganisms as VKM F-3688.
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Typification of Spirodecospora
A new collection of Anthostomella melnikii was made in Kunashir Island, Russia and was found to be identical to Spirodecospora bambusicola. Anthostomella melnikii therefore becomes the type of Spirodecospora. This information is formally published with notes on Anthostomella melnikii and Spirodecospora bambusicola.
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Anhellia verruco-scopiformans sp. nov. (Myriangiales) associated to scaby brooms of Croton migrans in Brazil
The new fungal species of Anhellia, Anhellia verruco-scopiformans associated with scaby brooms of Croton migrans from a montane grassland site in Brazil, is described and illustrated.
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First contribution to the study of Cryptosphaeria from Argentina
A new species of Cryptosphaeria, from Tierra del Fuego, Argentina, C. sulcata, is described. The representation of this genus in Argentina is low; only C. lignyota and the present species are known. Cryptosphaeria populicola, described by Spegazzini, is a later synonym of Eutypella scoparia. Cryptosphaerina heterospora and C. cumingii, proposed by Spegazzini, are excluded from the Diatrypaceae. Observations of asci with fluorescence microscopy are presented.
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Berkleasmium typhae sp. nov., a new hyphomycete on narrow-leaved cattail (Typha angustifolia) from Thailand
Berkleasmium typhae, collected from a decaying leaf of Typha angustifolia from Thailand is illustrated and described as a new species and compared with related taxa.
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Two new Meliola species from China
Meliola fabri parasitic on Castanopsis fabri, and Meliola hosagoudarii parasitic on Tutcheria microcarpa are described and illustrated as new species.
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The smut fungi (Ustilaginomycetes) of Hyparrhenia (Poaceae)
Twelve species of smut fungi are recognised on the grass genus Hyparrhenia. Detailed descriptions and synonyms with authors and place of publication are given for all recognised species. Each species is illustrated by line drawings of the habit and by LM and SEM pictures of the spores. New species described: Sporisorium niariense Vánky. New name proposed: Sporisorium leelingianum Vánky, replacing Ustilago tumefaciens Henn. New combinations proposed: Sporisorium congense (Syd. & P. Syd.) Vánky, based on Ustilago congensis; S. dembianense (Bacc.) Vánky, based on Sorosporium dembianense; S. ischaemoides (Henn.) Vánky, based on Ustilago ischaemoides; S. maranguense (Henn.) Vánky, based on Sorosporium maranguense. The following names are considered to be synonyms: Sorosporium tembuti Henn. & Pole-Evans is Sporisorium leelingianum Vánky; Ustilago nyassae Syd. & P. Syd. is Sporisorium transfissum (Tul. & C. Tul.) G. Deml; Ustilago puellaris Syd. is Sporisorium vanderystii (Henn.) Vánky. A further ten synonymies, established by L. Ling, are confirmed. Lectotypes are designated for Ustilago congensis Syd. & P. Syd. [= Sporisorium congense (Syd. & P. Syd.) Vánky], Ustilago tumefaciens Henn. (= Sporisorium leelingianum Vánky), and Sphacelotheca ruprechtii Syd. [= Sporisorium vanderystii (Henn.) Langdon & Full.]. A key to the species and a host-parasite list are provided to facilitate the identification of the smut fungi of Hyparrhenia.
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Microfungi on the Pandanaceae: Zygosporium, a review of the genus and two new species
Zygosporium pacificum sp. nov. and Z. pandanicola sp. nov. are introduced based on specimens identified on Pandanus leaves collected in the Pacific island nations of Niue and Vanuatu, and the Philippines, respectively. Both species are compared with presently accepted species and a key to the genus is provided. Specimens of Z. echinosporum, Z. gibbum, Z. minus and Z. oscheoides were also collected from members of Pandanaceae.
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Obeliospora minima sp. nov. and four other hyphomycetes with conidia bearing appendages
Five dematiaceous hyphomycetes with conidia bearing setulae, Obeliospora minima sp. nov., O. basispira, Bahusutrabeeja dwaya, Nawawia filiformis and Phialosporostilbe setosa, are described and illustrated. Obeliospora minima differs from the two known species of the genus, O. basispira and O. triappendiculata, by its smaller conidia with only 3 setulae. All these genera and species are reported for the first time from China.
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Volume 13
Freshwater fungi from bamboo and wood submerged in the Liput River in the Philippines
Eighty fungi were recorded on submerged bamboo and wood in the Liput River, Bario Alegria, Negros Occidentalis, the Philippines following collections made in April 1997 and August 2001. The frequency of occurrence of these fungi have also been investigated. The most common species overall was Didymella aptrootii, occurring on 23.5% of the samples, while Astrosphaeriella papillata (19.5%) and Acrogenospora sphaerocephala (14.5%) were also common. The most common species on bamboo was Didymella aptrootii, occurring in 39.2% of the samples, while the most common species on wood was Savoryella aquatica (18.7%). The average number of species identified from each sample was 2.28, which indicates a relatively high fungal diversity in the Liput River. The fungal communities on submerged bamboo and wood are compared and discussed. The results showed that, in the Liput River, bamboo support a different and diverse group of fungi in comparison to wood. The fungal community on submerged bamboo is, to some extent, similar to that on terrestrial bamboo in previous studies. The possible reasons are discussed.
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Grass cell wall degradation by fungal cellulases and hemicellulases
There has been an intensified interest in the microbial and enzymatic conversion of renewable raw materials into useful products, such as feed, chemicals and energy. Enzymes involved in these conversions have potential commercial applications in quite different fields. An interesting ascomycete able to convert up to 30% and 55% of grass cell wall components after 7 and 21 days respectively, was isolated during a screening programme for grass cell wall degrading microorganisms. This fungus may serve as an interesting source of novel xylanases and cellulases, since other cellulosic and hemicellulosic substrates, such as microcrystalline cellulose, cotton, paper and xylan were also converted. For example, unprinted newspaper (20g/L) was completely solubilised within 4-5 days at 30ºC. According to the type of cellulosic or hemicellulosic substrate, used as carbon source in the growth medium, enzyme synthesis profiles differed considerably, not only did the level of enzyme activity differ, also the type of enzyme produced differed. The pH and temperature profiles of the fungal enzyme activities present in the crude supernatant were determined. Most enzymes functioned optimally at 50-60ºC and at neutral pH. Thermal stability of the enzymes was compared at 30ºC and 60ºC. Addition of glycerol (30% w/v) stabilised some of the enzymes from thermal inactivation. The conversion of different substrates by the crude supernatant was followed by HPLC-analysis of the released mono- and oligosaccharides. The highest degree of conversion was observed with substrates such as unprinted newspaper (72%), xylan (61%), carboxymethyl cellulose (60%), Whatmann paper (53%) and cotton (44%). Microcrystalline cellulose and grass were hydrolysed to a lesser extent. Further characterisation of these enzymes is now underway, as well as the taxonomic identification of the ascomycete.
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Monitoring and safeguarding fungal resources worldwide: the need for an international collaborative MycoAction Plan
The challenge of monitoring and safeguarding the Earth´s fungal resources is a daunting one that must be confronted. With only 74-120 K of the estimated 1.5 million fungal species on the planet described and limited human and financial resources, how can we identify priority areas for both systematic research and conservation? Further, what balance should be aspired to between in situ and ex situ conservation, and how should that be reflected in national and international policy? Mycology has too low a profile and remains an orphan within botany and microbiology; how can that perception be changed? The systems in place for educating new generations of mycologists are also failing; how can that be rectified? While contact between mycologists nationally, regionally, and globally has improved remarkably in the last two decades, concerted action on a scale hitherto not attempted is necessary to address these fundamental questions. Some actions for inclusion in a potential new international initiative designed to start to redress some of these key issues are suggested. The proposals include actions needing to be taken by individuals through to ones meriting coverage in international intergovernmental treaties: many are accompanied by targets and datelines. This contribution is intended to serve as a draft action plan (MycoAction Plan) for discussion, elaboration, and revision by the whole mycological community - working under the auspices of the International Mycological Association (IMA). It is envisioned that there will be plans for action from the worldwide (MycoAction Worldwide Plan) to the personal (MycoAction Personal Plan).
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A cox2 phylogenetic hypothesis for the downy mildews and white rusts
Mitochondrially encoded cox2 sequences were used to infer evolutionary relationships of downy mildew and white rust taxa in a data set of 36 peronosporomycete isolates. The data set of 599 aligned nucleotides was analysed using neighbor joining, maximum parsimony, and maximum likelihood. These phylogenetic analyses did not infer separate monophyletic orders for the Pythiales versus downy mildews (Peronosporales), but do indicate that separation of monocotyledonus and dicotyledonous-infecting downy mildews into separate subclasses is not justified. Analyses of three species of Albugo, however, infer that Peronosporales are a polyphyletic group, unless this order is expanded to include species of the Pythiales and Rhipidiales. Whereas all examined downy mildew cox2 amino acid sequences bore the signature indel LEF/Y characteristic of the subclass Peronosporomycetidae the three Albugo species did not. Instead, the LEF/Y signature indel was replaced by a highly variable indel unique to each Albugo species. Collectively, these results indicate that the white rusts are only distantly related to downy mildews and constitute a distinct order basal to other orders within the Peronosporomycetidae.
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Mycology and its future in the Asia region
To fulfil commitments to the Convention on Biological Diversity (CBD), countries of the Asian region must understand that taxonomic expertise is vital for effective implementation. The Global Taxonomy Initiative (GTI) therefore states "understanding taxonomy to be a priority in implementing CBD". Fungi, in particular, are a group of organisms where countries in the region lack taxonomists to carry out the requirements of CBD. Previously, several Asian countries had groups of taxonomists active in the study of fungi, but in recent years the number of mycologists has dwindled because of other commitments, retirement without replacement and more importance being placed on other disciplines, such as biotechnology. This paper will briefly review the history of the study of fungi in the Asian region and then examine the current situation through an analysis of publications in international journals. It will address the effects of CBD on mycological taxonomic research in the region. It will then look at the future for taxonomic mycology in Asia? Suggestions on how to improve mycological expertise in a country are given, with particular reference to the successes in Hong Kong and Thailand.
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Alkaline-tolerant fungi from Thailand
A collection of 490 alkaline-tolerant fungi was made by isolating fungi from natural habitats using Petri-dishes with Potato Dextrose Agar medium buffered at pH 11.0. Alkaline-tolerant fungi were isolated from 51 out of 71 samples collected from different habitats in Thailand. Twenty-eight samples were taken from tree-holes with different pH. The remaining were samples of soil and sand, wood, seeds, rock holes, roots, leaf material or various other substrates. A total of 324 strains (66%) were screened for enzymes which were active at alkaline pH (alkaline enzymes). Arabinanase, amylase, potato-galactanase and protease activity were assayed. Alkaline-tolerant fungi isolated from tree-holes in alkaline and acidic habitats were good sources for alkaline enzyme production. This screening demonstrates that there exists a population of fungi able to tolerate high pH. Importantly, alkaline-tolerant fungi were isolated from acidic environments. Freshwater habitats appear to be a good source of fungi with alkaline enzyme production capability.
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Cloning of the phytase gene phyA from Aspergillus ficuum 3.4322 and its expression in yeast
A phyA gene was cloned from Aspergillus ficuum 3.4322 by reverse transcription polymerase chain reaction. The amplified fragment was cloned into the pMD18 T-vector and sequenced. Nucleotide sequence analysis of the phyA gene showed that it comprised 1347bp without the signal peptide sequence and encodes a polypeptide of 448 amino acids. The phyA sequence has been deposited in GenBank (accession number: AF537344). Expression vectors pYPA1 and pYPA2 were constructed by cloning the phyA gene with and without the signal peptide sequence into the yeast expression vector pYES2. The recombinant plasmids were transformed into Saccharomyces cerevisiae INVSc1 by the method of LiAc. Phytase activity was found in pYPA2 (about 11.55IU/ml) endocellular fluid and in pYPA1 supernatant (about 11.60IU/mL) by galactose inducing. The results demonstrated that the phyA gene had been expressed in Saccharomyces cerevisiae and the signal sequence of Aspergillu ficuum3.4322 could facilitate the phytase secretion from S. cerevisiae efficiently.
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Phylogenetic examples of Asian biodiversity in mushrooms and their relatives
Using characters from morphology, sexual recognition systems, DNA sequencing and RFLP patterns, geographic patterns and directions of geographic migration can be ascertained. In fungal groups such as Artomyces (Clavicorona), Flammulina, Lentinus, Panellus and Pleurotus, four principles can be elucidated: 1) for some sexually compatible groups, an obvious Eurasian cohesion can be identified, as opposed to a sister American population; 2) for certain groups, a strong Asian-western North American cohesion can be identified; 3) care must be taken to distinguish relatively ancient migration from recent events, the latter sometimes human-mediated; and 4) many sexually intercompatible ancestral populations existed before ultimate continental drift, later becoming allopatric but retaining sexual recognition. Sexual recognition among intercontinental populations appears to be a more reliable measure of relatedness than morphological characters and (to some extent) DNA sequence mutations.
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Population structure of Ascochyta rabiei in Australia based on STMS fingerprints
Nineteen sequence-tagged microsatellite site (STMS) primer pairs were used to determine the genetic structure within an Australian population of Ascochyta rabiei collected from Victoria, South Australia, Western Australia and New South Wales. None of the alleles found in Australia showed significant differences in allele frequencies or were at a gamete disequilibrium. A very low level of gene diversity (Ht = 0.02) was found within the Australian population with the majority of the diversity (92%) distributed within subpopulations. In contrast, high diversity was detected among the international isolates (Ht = 0.45) with 22% attributed to differentiation between countries. Of the 20 loci assessed, 16 were homozygous in the Australian population, and gene flow from four heterozygous loci was high. Of the seven genotypes identified within the Australian population, one was found in all Australian subpopulations and accounted for 82.9% of the total isolates tested. The Canadian and USA populations were more similar to each other than to the Australian or Syrian populations. Results from this study will be useful in breeding for chickpea resistant cultivars and developing necessary quarantine regulations.
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First record of a smut fungus on Byblidaceae: Yelsemia lowrieana a new species from Australia
Yelsemia lowrieana sp. nov. (Ustilaginomycetes) is described and illustrated from Byblis rorida collected in northwestern Western Australia. Infected plants had galls filled with spores on stems and pedicels. The spores were unusual in that each could be separated from a dark outer spore wall. This is the first record of a smut fungus on the dicotyledonous host family Byblidaceae.
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Biodiversity of Australian Smut Fungi
There are about 250 species of smut fungi known from Australia of which 95 are endemic. Fourteen of these endemic species were first collected in the period culminating with the publication of Daniel McAlpine's revision of Australian smut fungi in 1910. Of the 68 species treated by McAlpine, 10 were considered to be endemic to Australia at that time. Only 23 of the species treated by McAlpine have names that are currently accepted. During the following eighty years until 1990, a further 31 endemic species were collected and just 11 of these were named and described in that period. Since 1990, 50 further species of endemic smut fungi have been collected and named in Australia. There are 115 species that are restricted to either Australia or to Australia and the neighbouring countries of Indonesia, New Zealand, Papua New Guinea and the Philippines. These 115 endemic species occur in 24 genera, namely Anthracoidea (1 species), Bauerago (1), Cintractia (3), Dermatosorus (1), Entyloma (3), Farysporium (1), Fulvisporium (1), Heterotolyposporium (1), Lundquistia (1), Macalpinomyces (4), Microbotryum (2), Moreaua (20), Pseudotracya (1), Restiosporium (5), Sporisorium (26), Thecaphora (2), Tilletia (12), Tolyposporella (1), Tranzscheliella (1), Urocystis (2), Ustanciosporium (1), Ustilago (22), Websdanea (1) and Yelsemia (2). About a half of these local and regional endemic species occur on grasses and a quarter on sedges. The northern tropical savannah region of Australia offers most promise for the discovery of new endemic species. The agricultural, quarantine and environmental significance to Australia of some introduced species is discussed.
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Bioflavours and fragrances via fungi and their enzymes
Many fungi and yeasts have been found to produce de novo odorous compounds. Ceratocystis species and the yeasts Kluyveromyces lactis and Sporidiobolus salmonicolor produce a wide range of terpenes and lactones with fruity or floral flavours. The yeast Williopsis saturnus synthesizes de novo fruity ester flavours (i.e. volatile branched acetates); their yield can be improved by feeding fusel oil as a cheap source of precursor branched alcohols to the fermentation process. Geotrichum klebahnii also produces a broad spectrum of ethylesters of branched carboxylic acids, generating a pleasant fruity flavour. Also, precursor speciality fatty acids and PUFA's can be converted by fungi (such as Penicillum sp. and Botryodiplodia sp.) into flavour compounds, that provide "green notes", mushroom flavour, fruity lactones and cheese-flavoured methylketones. Similarly, a two step fungal process has been developed, whereby Aspergillus niger tranforms ferulic acid into vanillic acid, which basidiomycetes such as Pycnoporus cinnabarinus or Phanerochaete chrysosporium can further convert into vanillin. Furanone-flavours occur in many fruits, but have also been detected in microbial cultures. In this context, the soy sauce yeast Zygosaccharomyces rouxii forms the DMHF-furanone compound from glucose, when fed with fructose-1,6-biphosphate. Apart from precursored fermentation processes, enzymatic systems are also being developed to produce flavours i.e. yeast alcohol dehydrogenase can convert 1-phenyl-2-propanone into (S)-1-phenyl-2-propanol; in vitro co-enzyme regeneration often remains a bottleneck. Yeasts such as Torulopsis bombicola and Candida tropicalis can convert fatty acids or alkanes into musk-fragrance precursors. These examples indicate that interdisciplinary cooperation between microbiologists, biochemists, organic chemists and bioprocess engineers is needed to develop interesting laboratory findings into economic bioflavour production processes.
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Cintractiellaceae fam. nov. (Ustilaginomycetes)
A new family, Cintractiellaceae, is proposed to accommodate the two peculiar smut fungi in the genus Cintractiella, C. diplasiae and C. lamii.
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The Xylariales: a monophyletic order containing 7 families
A number of often conflicting, morphology-based classifications have been suggested for the Xylariales. However, no attempt has previously been made to test these classifications using molecular data. Phylogenetic relationships of 6 accepted families of the Xylariales (Amphisphaeriaceae, Clypeosphaeriaceae, Diatrypaceae, Graphostromataceae, Hyponectriaceae and Xylariaceae) plus members of the Apiosporaceae, were investigated using individual and combined analyses of 28S and 18S rDNA gene fragments. Analyses were conducted using maximum and weighted parsimony, and likelihood criteria. The Xylariales was found to be a monophyletic order containing the above 7 families. However, the 28S and 18S rDNA data proved to be inadequate in determining the familial relationships within the order. This finding is contrary to most other studies in ascomycete systematics using these particular genes.
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Ligninolytic enzymes from tropical endophytic Xylariaceae
This paper focuses on ligninolytic enzyme production by 581 endophytic Xylariaceae strains isolated from healthy tropical native plants of northern Thailand. Strain CMUX144 was found to be the best manganese independent peroxidase producer. The effect of pH, temperature, initial glucose concentration and ammonium tartrate concentration on enzyme production by this strain was investigated. An activity of 195 U/l was achieved after cultivation at the optimum condition for 6 days. Enzyme activity reached 292 U/l when the media was supplemented with veratryl alcohol. The decolourization of Poly R-478 at various C/N ratios in media was investigated. Biological decolourisation following 12 days of cultivation was higher than 91%.
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The rise and fall of natural products screening for drug discovery
Of the 520 new drugs approved between 1983 and 1994, 39% were natural products or derived from natural products. Nine of the 20 best-selling non-protein drugs in 1999 were either derived from or developed as the result of leads generated from natural products, and had annual sales of US$16B. Forty percent of the chemical scaffolds found in a published database of natural products are absent from synthetic chemistry. Despite these impressive figures, the enthusiasm for screening natural product extracts has followed peaks and troughs over a number of years. In recent years, the availability of large libraries of compounds produced by combinatorial chemistry and the pressure to shorten lead discovery timelines signalled another decline of interest in natural product extracts due to the "difficulty" of working with these complex mixtures of compounds. A number of approaches however, have been adopted by companies to improve the speed of, and more importantly, the effectiveness of screening natural products. As a result the use of natural products in industrial drug discovery programmes is currently undergoing a renaissance as some of the difficulties that were traditionally associated with using natural products in high throughput screening programmes are overcome. In addition, the dynamics of the drug screening business has been affected by the consolidation of large pharmaceutical companies, and the impact of gene sequencing and the increase in screen targets and technologies. Some of these changes and their effects upon natural products screening are also outlined.
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Biodiversity of arbuscular mycorrhizal fungi in tropical rainforests of Xishuangbanna, southwest China
The tropical rainforests of Xishuangbanna in southwestern China are located at the northern margin of the tropical rainforests of Southeast Asia. They harbour a high diversity of animals and plants. We investigated the diversity of arbuscular mycorrhizal fungi in soil under trees in these forests in order to establish if these fungi are also highly diverse. One hundred and eighteen rhizosphere soil samples were collected from a tropical rainforest in Xishuangbanna, and 525 arbuscular mycorrhizal fungal spores (or sporocarp) samples were obtained using the wet-sieve method. Twenty-seven species of arbuscular mycorrhizal fungi were identified from the collections. The species of arbuscular mycorrhizal fungi were of the genera Acaulospora (9 species), Gigaspora (1 species), Glomus (13 species), Sclerocystis (3 species) and Scutellospora (1 species). Acaulospora and Glomus were dominant at the study site. The arbuscular mycorrhizal fungi spore density ranged from 25 to 2550 per 100 g soil (average 675), and the species richness of arbuscular mycorrhizal fungi ranged from1-7 (average 4.4). Although tropical rainforests support a high diversity of plants, their associated symbiotic fungi are not as diverse as we had expected, possibly because arbuscular mycorrhizal fungi are not specific to their host plants.
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Volume 14
New microlichens from Taiwan
As a result of a three week field trip to Taiwan in 2001, 288 species of microlichens and related ascomycetes are reported. All are new to Taiwan, and most are so far unknown from mainland China as well. Of these, 83 species are new to East Asia, and 41 have never been reported from Asia. This includes the following species new to science: Arthonia parantillarum, Rimularia gyromuscosa, Rinodina placynthielloides, R. pluriloculata (described from mainland China), R. punctosorediata and Vezdaea flava.(View PDF)
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Identification of Armillaria biological species in Iran
Thirty-four isolates of Armillaria were collected from a variety of hosts in fruit orchard and forest regions in Iran. From each basidiocarp, monospore cultures were obtained. Haploid and diploid cultures were paired in all possible "haploid-haploid" and "diploid-haploid" combinations. Sexual compatibility was determined after 25-35 days based on differences in culture morphology of haploid colonies from white, with aerial mycelium (fluffy) to brownish, without aerial mycelium (crustose) which is characteristic of diploid cultures. Six compatibility groups named Iranian intersterility groups (IISG) were identified: IISG1 included one isolate, IISG2 seventeen isolates, IISG3 eight isolates, IISG4 one isolate, IISG5 two isolates and IISG6 five isolates. Haploid and diploid isolates from Iranian intersterility groups of Armillaria were paired with European and two Japanese haploid tester strains. Six intersterility groups were authenticated as A. mellea, A. cepistipes, A. gallica, A. borealis, Armillaria sp. (IISG5) and Armillaria sp. (IISG6). Two groups (IISG5 and IISG6) were, however, not compatible with any of tester strains representing different species.(View PDF)
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Xenosporium amomi sp. nov. from Zingiberaceae in Thailand
Xenosporium thaxteri and an undescribed species of Xenosporium were found as saprobes on dead pseudostems of Alpinia malaccensis and Amomum siamense in Doi Suthep-Pui National Park, Chiang Mai, Thailand. The new species, X. amomi is described, illustrated and compared with similar Xenosporium species. The diagnostic characters of the 14 accepted species of Xenosporium are provided and the genus is reviewed based on the literature.(View PDF)
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A review of Spegazzini taxa of Periconia and Sporocybe after over 115 years
Some groups or genera described by Spegazzini have never been re-examined. In this paper the type material of Sporocybe and Periconia species described by Spegazzini are studied. The genus Periconia is represented in Argentina by seven species: P. bromeliicola, P. byssoides, P. circinata, P. lateralis, P. minutissima, P. spegazzinii and P. tirupatiensis. Among Spegazzini's holotypes of Sporocybe, S. bromeliicola is considered a nomen dubium, S. antarctica is a lichen, S. chlorocephala is a synonym of Stromatographium stromaticum, Sporocybe penicillata is a synonym of Melanographium spinulosum and S. sacchari is a synonym of Doratomyces purpureofuscus. Doratomyces is represented by four species: D. asperulus, D. microsporus, D. purpureofuscus and D. stemonitis, three of which are reported under this genus for the first time.(View PDF)
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Pseudocercospora siraitiae sp. nov. (hyphomycetes) on leaves of Siraitia cf. siamensis (Cucurbitaceae) in China
A new species of Pseudocercospora was found on leaves of Siraitia cf. siamensis (Cucurbitaceae) in Yunnan Province, southwestern China. The fungus differs from the species known on cucurbitaceous hosts by its curved conidia and long conidiophores arising from superficial mycelium. Species of Siraitia have hitherto not been reported as host plants of any cercosporoid fungi. Therefore, P. siraitiae is proposed as a new species. A key to species of Pseudocercospora on cucurbitaceous hosts is also provided.(View PDF)
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Temporal changes in the prevalence of three species of Trichomycetes (Zygomycota: Zygomycotina) in Dipteran aquatic larvae from Argentina
Trichomycetes (fungi) inhabit the digestive tracts of insects and other arthropods. Three species of Harpellales (Zygomycotina: Trichomycetes) were collected in the field from Dipteran larvae at La Plata, Argentina every 15 days for 1.5 years from 1999 to 2000. Records of the occurrence of the insect larval hosts, Dasyhelea necrophila (Ceratopogonidae), Chironomus sp. (Chironomidae) and Culex pipiens (Culicidae), and the prevalence of their associated Harpellales, Carouxella coemeteriensis, Stachylina platensis and Smittium culisetae, are presented. The fungi were somewhat seasonal, being present during fall, winter and spring. Their abundance appeared to depend on host density. (View PDF)
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The genus Cordyceps and its allies from the Kuankuoshui Reserve in Guizhou III
Four new species in the genus Cordyceps from the Kuankoushui Reserve in Guizhou Province are described. They are Cordyceps furcicaodata, C. dermapterogena, C. cylindrostromata and C. rostrata. In addition, Cordyceps formicarum and C. takaomontana are reported for the first time in Guizhou Province, China. Specimens examined were deposited in the Laboratory of Fungus Resources, Guizhou University (LFRGU).(View PDF)
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Dactylella shizishanna sp. nov., from Shizi Mountain, China
A new species, Dactylella shizishanna, is described from Hubei province, China and compared with the similar species of Dactylella crassa. A key to the species of Dactylella producing adhesive nets is given. (View PDF)
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Diversity of filamentous fungi on woody litter of five mangrove plant species from the southwest coast of India
Fungal diversity on decaying intertidal wood of five mangrove plant species (Acanthus ilicifolius, Avicennia officinalis, Bruguiera gymnorrhiza, Rhizophora mucronata and Sonneratia caseolaris) accumulated on the floor of Udyavara mangrove stand of southwest coast of India was investigated. Wood samples collected during the monsoon and summer season were incubated in moist chambers and observed once every two weeks for up to six months. Ninety-one fungi belonging to 68 genera were recovered. Terrestrial fungi were dominant during the monsoon season, while marine fungi were dominant during the summer. Fungal richness and diversity were higher during the monsoon season than the summer. Rhizophora mucronata showed the highest Simpson's index at both seasons. The Shannon index was highest for Rhizophora mucronata in the monsoon season, while it was highest for Bruguiera gymnorrhiza during the summer. Rarefaction showed the highest expected number of species out of 150 identifications was from Rhizophora mucronata during the monsoon season (43 vs. 27-38 species), while it was highest in Sonneratia caseolaris during the summer (25 vs. 20-23 species). Maximum number of species per sample was observed on Bruguiera gymnorrhiza (monsoon, 2.9; summer, 3). Significant differences in the species diversity and expected number of species between the seasons were seen (t-test). Lignincola laevis, Savoryella lignicola and Trichocladium linderi were found in both seasons on all substrata. Lignincola laevis, Passeriniella mangrovei, Savoryella lignicola, S. paucispora, Trichocladium achrasporum and T. linderi were dominant during the monsoon season (>10%), while Cirrenalia pygmea, Lignincola laevis, Lulworthia grandispora, Nais sp., Savoryella lignicola and Zalerion varium were dominant during the summer. It is likely that terrestrial, freshwater and aero-aquatic fungi find ideal conditions for their development in mangroves during the monsoon season in the west coast of India.(View PDF)
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Abundance and diversity of marine fungi on intertidal woody litter of the west coast of India on prolonged incubation
Intertidal wood was collected from four coastal locations of the west coast of India during the post-monsoon season over two consecutive years. Samples were assessed for occurrence of filamentous marine fungi at different intervals of incubation in the laboratory (0, 2, 6, 12 and 18 months). Of the 59 taxa identified, 43 were ascomycetes, three basidiomycetes and 13 anamorphic fungi. Six months incubation yielded up to 66% of the total taxa encountered. The taxa found exclusively during specific incubation periods were highest during the 6 or 12 months incubation. Overall, Torpedospora radiata was the predominant fungus (11.6-21.5%), while Aniptodera chesapeakensis, Antennospora quadricornuta, Caryosporella rhizophorae, Corollospora intermedia, C. maritima, Crinigera sp., Dictyosporium pelagicum, Didymosphaeria sp., Halocyphina villosa, Periconia prolifica and Zalerion varium were frequent (>5%). These fungi attained the highest frequency of occurrence following 12 or 18 months of incubation period. Fungal richness and diversity were highest following six months of incubation. The decrease in the Jaccard's similarity index from two months to 18 months of incubation indicates that additional taxa occur on prolonged incubation. Incubation of intertidal wood of tropical beaches up to 18 months appear to be adequate period for reasonable assessment of marine fungal diversity. (View PDF)
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Two new species of Dactylaria (anamorphic fungi) and an update of species in Dactylaria sensu lato
The new species Dactylaria belliana and D. ficusicola were isolated from leaf litter of an Australian tropical rainforest. Dactylaria belliana differs from other species within this genus in having narrowly fusiform, uniseptate conidia and pigmented, denticulate conidiophores. Dactylaria ficusicola is similar in morphology to D. hemibeltranioidea but differs in producing only cylindrical narrow conidia while the latter species also has fusiform and naviculate conidia. The new species are described and illustrated here. A synopsis of species described in Dactylaria sensu de Hoog since the review by Goh and Hyde (1997) is provided based on the literature.(View PDF)
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Four new Asterina species from Yunnan, China
Asterina flacourtiaceicola parasitic on Flacourtiaceae indet., Asterina horsfieldiicola parasitic on Horsfieldia glabra (Myristicaceae), Asterina phoebicola parasitic on Phoeba lanceolata (Lauraceae), and Asterina stixis parasitic on Stixis suaveolens (Capparidaceae) are described and illustrated as new species.(View PDF)
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Diversity of fungi on wild fruits in Hong Kong
Eighteen species of wild fruits were examined for fruit-decaying fungi in nature. Surface-sterilized and non-sterilized fruits were incubated for 1-4 weeks and the fruiting bodies were identified. A total of 540 samples and 495 microfungi from 102 taxa were identified. Colletotrichum and Phomopsis were the most frequently recorded fungal genera. Ilex cinerea had the most diverse fungal species, while Wikstroemia nutans had the lowest diversity. Fifty-eight percent of fungal genera found in this survey have not been recorded on cultivated fruits. The fungal community that developed on non-sterilized fruits after incubation was generally more diverse than on surface-sterilized fruits, but both were colonized mostly by non-specific fungi. Related fruit species did not, in general, have more similar fungal communities than unrelated species. The ability of detached fruits to resist fungal infection under incubation varied greatly, with 77% of fruits of Wikstroemia nutans still not infected after 4 weeks. Fungi were classified into three types: pathogens, latent opportunists and fast-colonizing opportunists. Fast-colonizing opportunists, such as Cladosporium, Fusarium and Penicillium, were the most important taxa on wild fruits. (View PDF)
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Endophytes in Southeast Asia and Japan: their taxonomic diversity and potential applications
Endophytes were isolated by placing plant parts on agar following extensive washing in running tap water and sterilization by dipping in 75% ethanol and 5.3% sodium hypochlorite. Four hundred and two plants, including endemic plants, collected in Hokkaido, Japan, Indonesia and Malaysia were subjected to this treatment. At least one taxon was isolated from each healthy surface-sterilized stem from each plant examined, indicating that more than one microorganism live together inside a single plant. In total, 1133 strains of endophytic fungi and 678 strains of bacteria were isolated and are stored at -80ºC. These isolates were screened for useful products. Many endophytic fungi and bacteria strains produced useful extracellular enzymes that degrade xylan and mannan, common constituents of plant cells, into xylo-oligosaccharides and manno-oligosaccharides. About 10-30% of endophytes showed antifungal or antibacterial activities in their supernatants. Some fungal strains produced bioactive substances which showed testosterone-5-a-reductase inhibition or promotion in proliferation of mouse hair follicle cells in vitro. Some fungal and bacterial strains isolated from Indonesian plants also produced amylolytic enzymes and/or mannanase. These results demonstrate that endophytes are potential sources for discovering useful metabolites, such as oligosaccharides, antibiotics, and enzymes. Phylogenetic analyses of amplified 18S rDNA and the ITS reg | |